Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ctp--molybdopterin cytidylyltransferase | PviCFBP13507_01200 | Not Available | Negative | 275675 - 276298 | 22173.7 |
| flavin reductase | PviCFBP13507_01205 | Not Available | Positive | 276444 - 277028 | 21637.6 |
| succinate-semialdehyde dehydrogenase | PviCFBP13507_01210 | Not Available | Negative | 277207 - 278598 | 49849.5 |
| lysr family transcriptional regulator | PviCFBP13507_01215 | Not Available | Positive | 278701 - 279579 | 32268.8 |
| tartrate dehydrogenase | PviCFBP13507_01220 | Not Available | Negative | 279593 - 280684 | 40238.9 |
| lysr family transcriptional regulator | PviCFBP13507_01225 | Not Available | Positive | 280785 - 281702 | 34107.9 |
| abc transporter atp-binding protein | PviCFBP13507_01230 | Not Available | Negative | 281934 - 283088 | 41730.1 |
| abc transporter permease | PviCFBP13507_01235 | Not Available | Negative | 283085 - 283900 | 29763.6 |
| abc transporter permease | PviCFBP13507_01240 | Not Available | Negative | 283907 - 284863 | 34317.1 |
| abc transporter substrate-binding protein | PviCFBP13507_01245 | Not Available | Negative | 284848 - 285873 | 37000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
