Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | PviCFBP13507_13470 | Not Available | Negative | 3060075 - 3061322 | 45388.1 |
| hypothetical protein | PviCFBP13507_13475 | Not Available | Negative | 3061332 - 3061481 | 5217.34 |
| iron donor protein cyay | PviCFBP13507_13480 | Not Available | Positive | 3061718 - 3062050 | 12534.5 |
| duf1289 domain-containing protein | PviCFBP13507_13485 | Not Available | Positive | 3062050 - 3062301 | 9322.93 |
| nucleoside diphosphate kinase regulator | PviCFBP13507_13490 | Not Available | Positive | 3062440 - 3062847 | 14564.3 |
| class i adenylate cyclase | PviCFBP13507_13495 | Not Available | Negative | 3062977 - 3065823 | 108830.0 |
| tigr02647 family protein | PviCFBP13507_13500 | Not Available | Negative | 3066010 - 3066258 | 8689.45 |
| hypothetical protein | PviCFBP13507_13505 | Not Available | Negative | 3066476 - 3066751 | 10197.9 |
| glutathione s-transferase family protein | PviCFBP13507_13510 | Not Available | Positive | 3066946 - 3067611 | 24636.0 |
| argininosuccinate lyase | PviCFBP13507_13515 | Not Available | Negative | 3068043 - 3069437 | 51636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
