Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_13355 | Not Available | Positive | 3040745 - 3041665 | 34661.9 |
| methyl-accepting chemotaxis protein | PviCFBP13507_13360 | Not Available | Positive | 3041847 - 3043823 | 70310.3 |
| hypothetical protein | PviCFBP13507_13365 | Not Available | Negative | 3043930 - 3044670 | 27858.2 |
| hypothetical protein | PviCFBP13507_13370 | Not Available | Negative | 3044657 - 3044920 | 9185.21 |
| atp-dependent protease | PviCFBP13507_13375 | Not Available | Negative | 3045041 - 3046534 | 52887.8 |
| hypothetical protein | PviCFBP13507_13385 | Not Available | Positive | 3047574 - 3047765 | 6765.23 |
| helix-turn-helix domain-containing protein | PviCFBP13507_13395 | Not Available | Positive | 3048442 - 3048777 | 11955.9 |
| phosphatidylinositol kinase | PviCFBP13507_13400 | Not Available | Positive | 3048767 - 3050074 | 48378.9 |
| hypothetical protein | PviCFBP13507_13405 | Not Available | Negative | 3050105 - 3050728 | 22167.6 |
| l-fucose dehydrogenase | PviCFBP13507_13410 | Not Available | Negative | 3051031 - 3052014 | 35538.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
