Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate 3-monooxygenase | PviCFBP13507_13245 | Not Available | Positive | 3013976 - 3015160 | 44294.0 |
| mfs transporter | PviCFBP13507_13250 | Not Available | Positive | 3015503 - 3016828 | 48250.1 |
| hypothetical protein | PviCFBP13507_13255 | Not Available | Positive | 3016997 - 3017347 | 12895.4 |
| hypothetical protein | PviCFBP13507_13260 | Not Available | Positive | 3017347 - 3017841 | 17790.4 |
| type vi secretion system tip protein vgrg | PviCFBP13507_13265 | Not Available | Positive | 3018146 - 3020221 | 77126.1 |
| duf4123 domain-containing protein | PviCFBP13507_13270 | Not Available | Positive | 3020218 - 3021015 | 30817.4 |
| hypothetical protein | PviCFBP13507_13275 | Not Available | Positive | 3021012 - 3024800 | 139154.0 |
| hypothetical protein | PviCFBP13507_13280 | Not Available | Negative | 3025255 - 3025497 | 8863.25 |
| hypothetical protein | PviCFBP13507_13285 | Not Available | Positive | 3025444 - 3025824 | 15441.2 |
| hypothetical protein | PviCFBP13507_13290 | Not Available | Negative | 3026323 - 3026565 | 8705.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
