Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | PviCFBP13507_13195 | Not Available | Negative | 3002924 - 3004267 | 48759.4 |
| methyltransferase-domain protein | PviCFBP13507_13200 | Not Available | Negative | 3004359 - 3005270 | 34075.6 |
| glycosyltransferase subfamily gt2 protein | PviCFBP13507_13205 | Not Available | Positive | 3005551 - 3006360 | 30956.7 |
| hypothetical protein | PviCFBP13507_13210 | Not Available | Positive | 3006397 - 3007005 | 23327.8 |
| hypothetical protein | PviCFBP13507_13215 | Not Available | Positive | 3007022 - 3007678 | 25272.9 |
| histidine kinase | PviCFBP13507_13220 | Not Available | Negative | 3007747 - 3008442 | 25704.6 |
| response regulator | PviCFBP13507_13225 | Not Available | Negative | 3008439 - 3010040 | 58873.8 |
| sh3 domain-containing protein | PviCFBP13507_13230 | Not Available | Negative | 3010393 - 3011067 | 24227.0 |
| log family protein | PviCFBP13507_13235 | Not Available | Positive | 3011534 - 3012907 | 50798.3 |
| arac family transcriptional regulator | PviCFBP13507_13240 | Not Available | Negative | 3012957 - 3013826 | 32914.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
