Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook assembly protein flgd | PviCFBP13507_13145 | Not Available | Negative | 2994863 - 2995540 | 23011.8 |
| flagellar basal body rod protein flgc | PviCFBP13507_13150 | Not Available | Negative | 2995556 - 2995996 | 15606.1 |
| flagellar basal body rod protein flgb | PviCFBP13507_13155 | Not Available | Negative | 2996000 - 2996407 | 14826.3 |
| protein-glutamate o-methyltransferase cher | PviCFBP13507_13160 | Not Available | Negative | 2996908 - 2997750 | 31422.0 |
| chemotaxis protein chev | PviCFBP13507_13165 | Not Available | Negative | 2997799 - 2998725 | 34203.9 |
| flagella basal body p-ring formation protein flga | PviCFBP13507_13170 | Not Available | Positive | 2998804 - 2999562 | 27915.2 |
| flagellar biosynthesis anti-sigma factor flgm | PviCFBP13507_13175 | Not Available | Positive | 2999723 - 3000034 | 10893.7 |
| flagellar protein flgn | PviCFBP13507_13180 | Not Available | Positive | 3000085 - 3000552 | 17055.5 |
| pilus assembly protein pilz | PviCFBP13507_13185 | Not Available | Positive | 3000635 - 3001381 | 28619.1 |
| mfs transporter | PviCFBP13507_13190 | Not Available | Negative | 3001476 - 3002870 | 50066.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
