Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escs/yscs/hrcs family type iii secretion system export apparatus protein | PviCFBP13507_01150 | Not Available | Positive | 262698 - 262967 | 9420.01 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | PviCFBP13507_01155 | Not Available | Positive | 262974 - 263789 | 29340.2 |
| translocation protein in type iii secretion system, rhcu | PviCFBP13507_01160 | Not Available | Positive | 263789 - 264835 | 38169.4 |
| transcriptional regulator | PviCFBP13507_01165 | Not Available | Negative | 264852 - 267671 | 103973.0 |
| malate dehydrogenase (quinone) | PviCFBP13507_01170 | Not Available | Negative | 268202 - 269857 | 60481.3 |
| hypothetical protein | PviCFBP13507_01175 | Not Available | Negative | 270002 - 270235 | 9116.98 |
| (2fe-2s)-binding protein | PviCFBP13507_01180 | Not Available | Positive | 270834 - 271514 | 23605.1 |
| xanthine dehydrogenase | PviCFBP13507_01185 | Not Available | Positive | 271514 - 272497 | 34830.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | PviCFBP13507_01190 | Not Available | Positive | 272507 - 274723 | 80033.0 |
| xanthine dehydrogenase | PviCFBP13507_01195 | Not Available | Positive | 274726 - 275694 | 33992.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
