Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13507_13045 | Not Available | Negative | 2968150 - 2969565 | 50781.6 |
| pas domain-containing sensor histidine kinase | PviCFBP13507_13050 | Not Available | Negative | 2969565 - 2970779 | 44013.0 |
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13507_13055 | Not Available | Negative | 2970902 - 2972377 | 55469.9 |
| flagellar protein flit | PviCFBP13507_13060 | Not Available | Negative | 2972556 - 2972852 | 10807.8 |
| flagella export chaperone flis | PviCFBP13507_13065 | Not Available | Negative | 2972881 - 2973276 | 14437.6 |
| flagellar hook protein flid | PviCFBP13507_13070 | Not Available | Negative | 2973406 - 2974866 | 49298.3 |
| flagellar biosynthesis protein flag | PviCFBP13507_13075 | Not Available | Negative | 2974946 - 2975344 | 14386.0 |
| flagellin flic | PviCFBP13507_13080 | Not Available | Negative | 2975411 - 2976259 | 29274.2 |
| ketoacyl-acp synthase iii | PviCFBP13507_13085 | Not Available | Negative | 2976580 - 2977509 | 32975.2 |
| glycosyl transferase family 2 | PviCFBP13507_13090 | Not Available | Negative | 2977802 - 2980705 | 106552.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
