Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-length control protein flik | PviCFBP13507_12995 | Not Available | Negative | 2958140 - 2959549 | 47955.0 |
| hpt domain-containing protein | PviCFBP13507_13000 | Not Available | Negative | 2959640 - 2959996 | 13498.9 |
| fused response regulator/phosphatase | PviCFBP13507_13005 | Not Available | Negative | 2960040 - 2961737 | 61752.4 |
| anti-sigma factor antagonist | PviCFBP13507_13010 | Not Available | Negative | 2961741 - 2962043 | 11168.3 |
| flagella biosynthesis chaperone flij | PviCFBP13507_13015 | Not Available | Negative | 2962123 - 2962572 | 17466.7 |
| flagellar protein export atpase flii | PviCFBP13507_13020 | Not Available | Negative | 2962579 - 2963937 | 48373.8 |
| flagellar assembly protein flih | PviCFBP13507_13025 | Not Available | Negative | 2963927 - 2964745 | 30035.4 |
| flagellar motor switch protein flig | PviCFBP13507_13030 | Not Available | Negative | 2964761 - 2965777 | 36960.7 |
| flagellar basal body m-ring protein flif | PviCFBP13507_13035 | Not Available | Negative | 2965770 - 2967551 | 63084.8 |
| flagellar hook-basal body complex protein flie | PviCFBP13507_13040 | Not Available | Negative | 2967567 - 2967902 | 11892.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
