Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flhf | PviCFBP13507_12945 | Not Available | Negative | 2948455 - 2949783 | 48242.4 |
| flagellar biosynthesis protein flha | PviCFBP13507_12950 | Not Available | Negative | 2949795 - 2951924 | 76172.4 |
| flagellar biosynthesis protein flhb | PviCFBP13507_12955 | Not Available | Negative | 2952123 - 2953259 | 41783.6 |
| flagellar type iii secretion system protein flir | PviCFBP13507_12960 | Not Available | Negative | 2953261 - 2954046 | 28077.9 |
| flagellar biosynthetic protein fliq | PviCFBP13507_12965 | Not Available | Negative | 2954053 - 2954322 | 9912.81 |
| flagellar biosynthetic protein flip | PviCFBP13507_12970 | Not Available | Negative | 2954348 - 2955100 | 27171.7 |
| flagellar biosynthetic protein flio | PviCFBP13507_12975 | Not Available | Negative | 2955100 - 2955537 | 15665.8 |
| flagellar motor switch protein flin | PviCFBP13507_12980 | Not Available | Negative | 2955538 - 2955999 | 16238.2 |
| flagellar motor switch protein flim | PviCFBP13507_12985 | Not Available | Negative | 2956062 - 2957030 | 35932.6 |
| flagellar basal body-associated protein flil | PviCFBP13507_12990 | Not Available | Negative | 2957040 - 2957540 | 17857.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
