Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | PviCFBP13507_12895 | Not Available | Negative | 2938394 - 2939248 | 30820.2 |
| para family protein | PviCFBP13507_12900 | Not Available | Negative | 2939351 - 2940139 | 28442.6 |
| flagellar motor protein motd | PviCFBP13507_12905 | Not Available | Negative | 2940184 - 2941071 | 32146.1 |
| flagellar motor protein | PviCFBP13507_12910 | Not Available | Negative | 2941078 - 2941818 | 26044.3 |
| chemotaxis response regulator protein-glutamate methylesterase | PviCFBP13507_12915 | Not Available | Negative | 2941818 - 2942990 | 41216.0 |
| chemotaxis protein chea | PviCFBP13507_12920 | Not Available | Negative | 2943042 - 2945300 | 79822.3 |
| protein phosphatase chez | PviCFBP13507_12925 | Not Available | Negative | 2945334 - 2946119 | 29390.5 |
| chemotaxis protein chey | PviCFBP13507_12930 | Not Available | Negative | 2946139 - 2946525 | 14433.7 |
| rna polymerase sigma factor flia | PviCFBP13507_12935 | Not Available | Negative | 2946769 - 2947509 | 27549.4 |
| mind/para family protein | PviCFBP13507_12940 | Not Available | Negative | 2947506 - 2948339 | 29753.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
