Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_12845 | Not Available | Positive | 2930022 - 2930561 | 20038.7 |
| cadmium-translocating p-type atpase | PviCFBP13507_12850 | Not Available | Positive | 2930563 - 2933016 | 88074.9 |
| cbb3-type cytochrome oxidase assembly protein ccos | PviCFBP13507_12855 | Not Available | Positive | 2932995 - 2933213 | 7820.18 |
| sulfite exporter taue/safe family protein | PviCFBP13507_12860 | Not Available | Positive | 2933222 - 2933905 | 24378.8 |
| oxygen-independent coproporphyrinogen iii oxidase | PviCFBP13507_12865 | Not Available | Positive | 2934011 - 2935393 | 52594.9 |
| chemotaxis protein | PviCFBP13507_12870 | Not Available | Negative | 2935408 - 2935875 | 16181.5 |
| fumarate/nitrate reduction transcriptional regulator fnr | PviCFBP13507_12875 | Not Available | Positive | 2936027 - 2936761 | 27186.8 |
| adenine phosphoribosyltransferase | PviCFBP13507_12880 | Not Available | Positive | 2936825 - 2937373 | 20086.3 |
| duf2802 domain-containing protein | PviCFBP13507_12885 | Not Available | Negative | 2937456 - 2937857 | 14607.8 |
| chemotaxis protein chew | PviCFBP13507_12890 | Not Available | Negative | 2937858 - 2938337 | 17626.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
