Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphoerythronate dehydrogenase pdxb | PviCFBP13507_12745 | Not Available | Negative | 2905547 - 2906698 | 42036.5 |
| sulfurtransferase tusa | PviCFBP13507_12750 | Not Available | Negative | 2906770 - 2907024 | 9327.3 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | PviCFBP13507_12755 | Not Available | Negative | 2907075 - 2908157 | 40771.4 |
| aconitate hydratase acna | PviCFBP13507_12760 | Not Available | Positive | 2908346 - 2911090 | 99379.4 |
| cpbp family intramembrane metalloprotease | PviCFBP13507_12765 | Not Available | Positive | 2911213 - 2912004 | 27915.6 |
| pas domain s-box protein | PviCFBP13507_12770 | Not Available | Positive | 2912102 - 2913667 | 57089.4 |
| hypothetical protein | PviCFBP13507_12775 | Not Available | Positive | 2913966 - 2914631 | 24062.7 |
| hypothetical protein | PviCFBP13507_12780 | Not Available | Positive | 2915056 - 2915583 | 19621.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13507_12785 | Not Available | Negative | 2915651 - 2917243 | 56771.4 |
| hypothetical protein | PviCFBP13507_12790 | Not Available | Positive | 2918163 - 2919998 | 66118.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
