Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ld-carboxypeptidase | PviCFBP13507_12695 | Not Available | Negative | 2896036 - 2896971 | 32357.0 |
| nadp-dependent oxidoreductase | PviCFBP13507_12700 | Not Available | Positive | 2897199 - 2898209 | 36006.6 |
| orotidine-5'-phosphate decarboxylase | PviCFBP13507_12705 | Not Available | Negative | 2898359 - 2899093 | 25965.7 |
| ethanolamine permease | PviCFBP13507_12710 | Not Available | Positive | 2899386 - 2900750 | 48085.2 |
| duf2897 domain-containing protein | PviCFBP13507_12715 | Not Available | Positive | 2900878 - 2901045 | 6337.91 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_12720 | Not Available | Negative | 2901086 - 2901913 | 31198.4 |
| exonuclease | PviCFBP13507_12725 | Not Available | Positive | 2902184 - 2902726 | 20911.0 |
| duf1255 domain-containing protein | PviCFBP13507_12730 | Not Available | Positive | 2902903 - 2903184 | 10289.0 |
| abc transporter atp-binding protein | PviCFBP13507_12735 | Not Available | Negative | 2903241 - 2905019 | 64260.6 |
| hypothetical protein | PviCFBP13507_12740 | Not Available | Positive | 2905315 - 2905494 | 6445.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
