Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_12645 | Not Available | Positive | 2889544 - 2889864 | 11246.0 |
| dna mismatch repair protein muts | PviCFBP13507_12650 | Not Available | Positive | 2889910 - 2890467 | 20872.2 |
| hypothetical protein | PviCFBP13507_12655 | Not Available | Negative | 2890494 - 2890658 | 5332.48 |
| gtp cyclohydrolase i fole | PviCFBP13507_12660 | Not Available | Positive | 2890857 - 2891429 | 21102.8 |
| glutaredoxin | PviCFBP13507_12665 | Not Available | Positive | 2891505 - 2891870 | 13700.8 |
| duf1311 domain-containing protein | PviCFBP13507_12670 | Not Available | Negative | 2891890 - 2892276 | 14166.1 |
| glutathione s-transferase family protein | PviCFBP13507_12675 | Not Available | Negative | 2892344 - 2892946 | 23001.6 |
| plp-dependent aminotransferase family protein | PviCFBP13507_12680 | Not Available | Negative | 2892992 - 2894158 | 43085.6 |
| marr family transcriptional regulator | PviCFBP13507_12685 | Not Available | Positive | 2894240 - 2894710 | 17478.0 |
| hypothetical protein | PviCFBP13507_12690 | Not Available | Positive | 2894837 - 2896030 | 41120.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
