Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | PviCFBP13507_12545 | Not Available | Negative | 2870800 - 2872209 | 52510.1 |
| ribonuclease e inhibitor rrab | PviCFBP13507_12550 | Not Available | Negative | 2872741 - 2873082 | 13091.3 |
| hypothetical protein | PviCFBP13507_12555 | Not Available | Negative | 2873324 - 2873560 | 9139.66 |
| hypothetical protein | PviCFBP13507_12560 | Not Available | Negative | 2873769 - 2875862 | 77859.9 |
| polyamine aminopropyltransferase | PviCFBP13507_12565 | Not Available | Negative | 2876130 - 2876990 | 31985.3 |
| hypothetical protein | PviCFBP13507_12570 | Not Available | Negative | 2877189 - 2877380 | 6691.69 |
| zip family metal transporter | PviCFBP13507_12575 | Not Available | Positive | 2877545 - 2878471 | 31827.4 |
| hypothetical protein | PviCFBP13507_12580 | Not Available | Negative | 2878472 - 2878990 | 18699.2 |
| ankyrin repeat domain-containing protein | PviCFBP13507_12585 | Not Available | Negative | 2879091 - 2879630 | 19095.9 |
| duf3509 domain-containing protein | PviCFBP13507_12590 | Not Available | Positive | 2879964 - 2880242 | 10504.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
