Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c family protein | PviCFBP13507_12495 | Not Available | Positive | 2862989 - 2863357 | 13255.0 |
| duf4124 domain-containing protein | PviCFBP13507_12500 | Not Available | Positive | 2863729 - 2864136 | 14337.0 |
| ethd family reductase | PviCFBP13507_12505 | Not Available | Negative | 2864140 - 2864454 | 11738.1 |
| hypothetical protein | PviCFBP13507_12510 | Not Available | Positive | 2864627 - 2864920 | 11101.9 |
| crotonase/enoyl-coa hydratase family protein | PviCFBP13507_12515 | Not Available | Positive | 2865020 - 2865709 | 24423.6 |
| magnesium and cobalt transport protein cora | PviCFBP13507_12520 | Not Available | Positive | 2865837 - 2866808 | 36440.2 |
| amidotransferase | PviCFBP13507_12525 | Not Available | Negative | 2867128 - 2867856 | 27186.6 |
| rhodanese-like domain-containing protein | PviCFBP13507_12530 | Not Available | Positive | 2868538 - 2868912 | 13546.0 |
| transglutaminase family protein | PviCFBP13507_12535 | Not Available | Negative | 2869001 - 2869831 | 30758.3 |
| alpha-e domain-containing protein | PviCFBP13507_12540 | Not Available | Negative | 2869828 - 2870787 | 36093.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
