Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing abc transporter permease subunit | PviCFBP13507_12395 | Not Available | Negative | 2837215 - 2838465 | 45573.3 |
| pilz domain-containing protein | PviCFBP13507_12400 | Not Available | Positive | 2838568 - 2839155 | 21765.9 |
| glycerophosphodiester phosphodiesterase | PviCFBP13507_12405 | Not Available | Positive | 2839211 - 2839933 | 27038.5 |
| si-specific nad(p)(+) transhydrogenase | PviCFBP13507_12410 | Not Available | Negative | 2839976 - 2841370 | 50718.5 |
| thiamine biosynthesis protein apbe | PviCFBP13507_12415 | Not Available | Negative | 2841506 - 2842528 | 37363.3 |
| citrate-proton symporter | PviCFBP13507_12420 | Not Available | Positive | 2843015 - 2844307 | 45999.9 |
| hypothetical protein | PviCFBP13507_12425 | Not Available | Negative | 2844420 - 2844674 | 9459.05 |
| mfs transporter | PviCFBP13507_12430 | Not Available | Negative | 2844802 - 2846067 | 45669.9 |
| glyceraldehyde-3-phosphate dehydrogenase | PviCFBP13507_12435 | Not Available | Negative | 2846240 - 2847703 | 53263.7 |
| transcription-repair coupling factor | PviCFBP13507_12440 | Not Available | Positive | 2847893 - 2851345 | 128973.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
