Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane dipeptidase | PviCFBP13507_12140 | Not Available | Positive | 2749235 - 2750578 | 49403.1 |
| aminotransferase | PviCFBP13507_12145 | Not Available | Positive | 2750575 - 2751855 | 47516.8 |
| chromophore maturation protein pvdo | PviCFBP13507_12150 | Not Available | Positive | 2751913 - 2752773 | 31422.8 |
| cyclic peptide export abc transporter | PviCFBP13507_12155 | Not Available | Positive | 2752837 - 2754501 | 61520.1 |
| tonb-dependent siderophore receptor | PviCFBP13507_12160 | Not Available | Positive | 2755253 - 2757499 | 81757.2 |
| hypothetical protein | PviCFBP13507_12165 | Not Available | Positive | 2757515 - 2757727 | 7413.92 |
| tonb-dependent siderophore receptor | PviCFBP13507_12170 | Not Available | Positive | 2757757 - 2760249 | 91325.9 |
| non-ribosomal peptide synthetase | PviCFBP13507_12175 | Not Available | Negative | 2760490 - 2769117 | 317072.0 |
| non-ribosomal peptide synthetase | PviCFBP13507_12180 | Not Available | Negative | 2769119 - 2775589 | 239704.0 |
| non-ribosomal peptide synthetase | PviCFBP13507_12185 | Not Available | Negative | 2775836 - 2783635 | 288152.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
