Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_01050 | Not Available | Negative | 243484 - 244356 | 32101.0 |
| glyoxalase | PviCFBP13507_01055 | Not Available | Positive | 244491 - 244916 | 16023.0 |
| hypothetical protein | PviCFBP13507_01060 | Not Available | Negative | 244978 - 248457 | 124017.0 |
| smad/fha domain protein | PviCFBP13507_01065 | Not Available | Positive | 249342 - 250307 | 34425.3 |
| hypothetical protein | PviCFBP13507_01070 | Not Available | Positive | 250304 - 250663 | 13443.2 |
| tetratricopeptide repeat protein | PviCFBP13507_01075 | Not Available | Positive | 250660 - 250998 | 12395.0 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | PviCFBP13507_01080 | Not Available | Positive | 250995 - 253139 | 77867.5 |
| type ii and iii secretion system protein rhcc2 | PviCFBP13507_01085 | Not Available | Positive | 253136 - 254452 | 45778.7 |
| hypothetical protein | PviCFBP13507_01090 | Not Available | Positive | 254465 - 254881 | 15106.0 |
| tetratricopeptide repeat protein | PviCFBP13507_01095 | Not Available | Negative | 254884 - 255666 | 28108.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
