Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | PviCFBP13507_11990 | Not Available | Negative | 2714311 - 2715216 | 33119.1 |
| hydroxyacid dehydrogenase | PviCFBP13507_11995 | Not Available | Positive | 2715397 - 2716449 | 37703.4 |
| iclr family transcriptional regulator | PviCFBP13507_12000 | Not Available | Negative | 2716451 - 2717263 | 29564.7 |
| mfs transporter | PviCFBP13507_12005 | Not Available | Negative | 2717329 - 2718639 | 47751.1 |
| galactonate dehydratase | PviCFBP13507_12010 | Not Available | Negative | 2718751 - 2719899 | 42337.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | PviCFBP13507_12015 | Not Available | Negative | 2719961 - 2720590 | 21839.7 |
| 2-dehydro-3-deoxygalactonokinase | PviCFBP13507_12020 | Not Available | Negative | 2720592 - 2721596 | 35689.6 |
| aspartate-semialdehyde dehydrogenase | PviCFBP13507_12025 | Not Available | Negative | 2721775 - 2722887 | 40457.1 |
| 3-isopropylmalate dehydrogenase | PviCFBP13507_12030 | Not Available | Negative | 2722958 - 2724040 | 38924.1 |
| sam-dependent methyltransferase | PviCFBP13507_12035 | Not Available | Negative | 2724109 - 2724873 | 27975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
