Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_11940 | Not Available | Negative | 2704688 - 2705293 | 22134.4 |
| hypothetical protein | PviCFBP13507_11945 | Not Available | Negative | 2705349 - 2705606 | 8984.93 |
| translation initiation factor 2 | PviCFBP13507_11950 | Not Available | Negative | 2705698 - 2706354 | 23343.1 |
| plp-dependent aminotransferase family protein | PviCFBP13507_11955 | Not Available | Negative | 2706466 - 2707905 | 53325.6 |
| duf4398 domain-containing protein | PviCFBP13507_11960 | Not Available | Negative | 2708233 - 2709048 | 30161.9 |
| duf4398 domain-containing protein | PviCFBP13507_11965 | Not Available | Negative | 2709045 - 2709395 | 12735.1 |
| abc transporter substrate-binding protein | PviCFBP13507_11970 | Not Available | Negative | 2709408 - 2710250 | 30422.6 |
| electron transfer flavoprotein subunit alpha | PviCFBP13507_11975 | Not Available | Negative | 2710371 - 2711300 | 31367.5 |
| electron transfer flavoprotein subunit beta/fixa family protein | PviCFBP13507_11980 | Not Available | Negative | 2711301 - 2712050 | 26412.3 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | PviCFBP13507_11985 | Not Available | Positive | 2712589 - 2714244 | 60460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
