Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase subunit alpha | PviCFBP13507_11890 | Not Available | Negative | 2691530 - 2692411 | 30004.5 |
| adp-forming succinate--coa ligase subunit beta | PviCFBP13507_11895 | Not Available | Negative | 2692411 - 2693577 | 41228.8 |
| dihydrolipoyl dehydrogenase | PviCFBP13507_11900 | Not Available | Negative | 2693784 - 2695220 | 50091.6 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | PviCFBP13507_11905 | Not Available | Negative | 2695389 - 2696609 | 42439.1 |
| 2-oxoglutarate dehydrogenase e1 component | PviCFBP13507_11910 | Not Available | Negative | 2696651 - 2699482 | 106477.0 |
| succinate dehydrogenase iron-sulfur subunit | PviCFBP13507_11915 | Not Available | Negative | 2699743 - 2700447 | 26096.7 |
| succinate dehydrogenase flavoprotein subunit | PviCFBP13507_11920 | Not Available | Negative | 2700460 - 2702232 | 63401.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | PviCFBP13507_11925 | Not Available | Negative | 2702236 - 2702604 | 13765.1 |
| succinate dehydrogenase, cytochrome b556 subunit | PviCFBP13507_11930 | Not Available | Negative | 2702598 - 2702972 | 13354.9 |
| citrate (si)-synthase | PviCFBP13507_11935 | Not Available | Positive | 2703335 - 2704624 | 47602.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
