Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4389 domain-containing protein | PviCFBP13507_11840 | Not Available | Negative | 2679782 - 2680126 | 12717.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | PviCFBP13507_11845 | Not Available | Negative | 2680152 - 2681177 | 36539.6 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_11850 | Not Available | Positive | 2681464 - 2683389 | 70880.7 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | PviCFBP13507_11855 | Not Available | Positive | 2683610 - 2684125 | 18807.8 |
| beta-ketoacyl-acp synthase i | PviCFBP13507_11860 | Not Available | Positive | 2684136 - 2685353 | 43083.3 |
| pirin family protein | PviCFBP13507_11865 | Not Available | Positive | 2685538 - 2686389 | 30877.9 |
| dienelactone hydrolase | PviCFBP13507_11870 | Not Available | Negative | 2686411 - 2687145 | 26196.2 |
| molecular chaperone htpg | PviCFBP13507_11875 | Not Available | Negative | 2687236 - 2689143 | 71437.7 |
| hypothetical protein | PviCFBP13507_11880 | Not Available | Positive | 2689479 - 2689751 | 9492.89 |
| branched-chain amino acid transport system ii carrier protein | PviCFBP13507_11885 | Not Available | Negative | 2689833 - 2691146 | 45276.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
