Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | PviCFBP13507_11735 | Not Available | Negative | 2653895 - 2654374 | 18205.2 |
| hypothetical protein | PviCFBP13507_11740 | Not Available | Positive | 2654768 - 2655934 | 45609.1 |
| cation diffusion facilitator family transporter | PviCFBP13507_11745 | Not Available | Negative | 2655941 - 2656834 | 31765.8 |
| polyribonucleotide nucleotidyltransferase | PviCFBP13507_11750 | Not Available | Negative | 2656861 - 2657280 | 14720.0 |
| hypothetical protein | PviCFBP13507_11760 | Not Available | Positive | 2658304 - 2661348 | 112667.0 |
| pilus assembly protein | PviCFBP13507_11765 | Not Available | Positive | 2661666 - 2662217 | 18717.2 |
| pilus assembly protein | PviCFBP13507_11770 | Not Available | Positive | 2662316 - 2663068 | 27565.2 |
| ferrous iron transporter b | PviCFBP13507_11775 | Not Available | Positive | 2663108 - 2665615 | 90929.5 |
| type 1 fimbrial protein | PviCFBP13507_11780 | Not Available | Positive | 2665665 - 2666738 | 37504.1 |
| hypothetical protein | PviCFBP13507_11785 | Not Available | Negative | 2666752 - 2668200 | 53170.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
