Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_11635 | Not Available | Negative | 2630836 - 2631441 | 22117.2 |
| leucine--trna ligase | PviCFBP13507_11640 | Not Available | Negative | 2631529 - 2634135 | 97136.7 |
| hypothetical protein | PviCFBP13507_11645 | Not Available | Positive | 2634447 - 2634797 | 12831.5 |
| ydcf family protein | PviCFBP13507_11650 | Not Available | Positive | 2634900 - 2635661 | 27600.0 |
| apolipoprotein n-acyltransferase | PviCFBP13507_11655 | Not Available | Negative | 2635710 - 2637230 | 55723.4 |
| hlyc/corc family transporter | PviCFBP13507_11660 | Not Available | Negative | 2637262 - 2638104 | 31477.6 |
| rrna maturation rnase ybey | PviCFBP13507_11665 | Not Available | Negative | 2638110 - 2638607 | 18803.8 |
| phoh family protein | PviCFBP13507_11670 | Not Available | Negative | 2638600 - 2639622 | 38321.1 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | PviCFBP13507_11675 | Not Available | Negative | 2639792 - 2641120 | 49472.1 |
| duf1820 domain-containing protein | PviCFBP13507_11680 | Not Available | Positive | 2641249 - 2641575 | 12476.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
