Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13507_01000 | Not Available | Positive | 232328 - 233419 | 38501.1 |
| acrb/acrd/acrf family protein | PviCFBP13507_01005 | Not Available | Positive | 233423 - 236503 | 109839.0 |
| amino acid permease | PviCFBP13507_01010 | Not Available | Negative | 236493 - 237809 | 45680.4 |
| mbl fold metallo-hydrolase | PviCFBP13507_01015 | Not Available | Negative | 237913 - 238776 | 32597.6 |
| hypothetical protein | PviCFBP13507_01020 | Not Available | Positive | 239241 - 239753 | 18662.3 |
| hypothetical protein | PviCFBP13507_01025 | Not Available | Positive | 239811 - 240053 | 9228.92 |
| hypothetical protein | PviCFBP13507_01030 | Not Available | Positive | 240178 - 241047 | 31371.6 |
| dna methylase | PviCFBP13507_01035 | Not Available | Positive | 241342 - 241773 | 16153.5 |
| duf72 domain-containing protein | PviCFBP13507_01040 | Not Available | Positive | 241770 - 242492 | 27057.0 |
| hypothetical protein | PviCFBP13507_01045 | Not Available | Negative | 243149 - 243391 | 9021.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
