Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter permease livm | PviCFBP13507_11425 | Not Available | Positive | 2593625 - 2594926 | 46792.9 |
| abc transporter atp-binding protein | PviCFBP13507_11430 | Not Available | Positive | 2594923 - 2595798 | 32241.2 |
| abc transporter atp-binding protein | PviCFBP13507_11435 | Not Available | Positive | 2595795 - 2596511 | 26171.0 |
| sdr family nad(p)-dependent oxidoreductase | PviCFBP13507_11440 | Not Available | Positive | 2597265 - 2598029 | 27308.5 |
| n-acylglucosamine 2-epimerase | PviCFBP13507_11445 | Not Available | Negative | 2598030 - 2599244 | 45017.1 |
| protein hupe | PviCFBP13507_11450 | Not Available | Negative | 2599387 - 2599959 | 18942.6 |
| urease accessory protein ureg | PviCFBP13507_11455 | Not Available | Negative | 2599982 - 2600599 | 22040.5 |
| urease accessory protein uref | PviCFBP13507_11460 | Not Available | Negative | 2600621 - 2601295 | 24994.8 |
| urease accessory protein uree | PviCFBP13507_11465 | Not Available | Negative | 2601292 - 2601792 | 18849.3 |
| tetr family transcriptional regulator | PviCFBP13507_11470 | Not Available | Negative | 2602065 - 2602697 | 23406.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
