Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase serb | PviCFBP13507_11215 | Not Available | Positive | 2541330 - 2542544 | 43787.9 |
| molecular chaperone | PviCFBP13507_11220 | Not Available | Negative | 2542587 - 2544371 | 66543.6 |
| hdod domain-containing protein | PviCFBP13507_11230 | Not Available | Negative | 2546349 - 2547884 | 57196.7 |
| flagellar motor stator protein mota | PviCFBP13507_11235 | Not Available | Positive | 2548092 - 2548943 | 30411.6 |
| motility protein motb | PviCFBP13507_11240 | Not Available | Positive | 2548947 - 2549978 | 37227.9 |
| small ribosomal subunit biogenesis gtpase rsga | PviCFBP13507_11245 | Not Available | Negative | 2550054 - 2551085 | 37398.8 |
| oligoribonuclease | PviCFBP13507_11250 | Not Available | Positive | 2551194 - 2551727 | 20525.4 |
| hypothetical protein | PviCFBP13507_11255 | Not Available | Positive | 2551841 - 2552452 | 22282.2 |
| trna epoxyqueuosine(34) reductase queg | PviCFBP13507_11260 | Not Available | Negative | 2552508 - 2553590 | 40398.2 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | PviCFBP13507_11265 | Not Available | Positive | 2553654 - 2555144 | 51160.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
