Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_11165 | Not Available | Positive | 2530612 - 2530974 | 13706.2 |
| hypothetical protein | PviCFBP13507_11170 | Not Available | Positive | 2531016 - 2531231 | 7618.66 |
| 3',5'-cyclic-amp phosphodiesterase | PviCFBP13507_11175 | Not Available | Positive | 2531324 - 2532130 | 29168.5 |
| esterase | PviCFBP13507_11180 | Not Available | Positive | 2532219 - 2532836 | 22391.8 |
| dna topoisomerase iv subunit b | PviCFBP13507_11185 | Not Available | Positive | 2532910 - 2534814 | 69495.0 |
| dna topoisomerase iv | PviCFBP13507_11190 | Not Available | Positive | 2534811 - 2535788 | 35742.5 |
| tigr02281 family clan aa aspartic protease | PviCFBP13507_11195 | Not Available | Positive | 2535785 - 2536306 | 18587.4 |
| dna topoisomerase iv subunit a | PviCFBP13507_11200 | Not Available | Positive | 2536317 - 2538572 | 83005.8 |
| hypothetical protein | PviCFBP13507_11205 | Not Available | Positive | 2538753 - 2539451 | 25372.8 |
| hamp domain-containing protein | PviCFBP13507_11210 | Not Available | Negative | 2539643 - 2541199 | 57033.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
