Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | PviCFBP13507_11105 | Not Available | Positive | 2518817 - 2520097 | 47129.8 |
| channel protein tolc | PviCFBP13507_11110 | Not Available | Negative | 2520265 - 2521704 | 52894.6 |
| phosphomethylpyrimidine synthase thic | PviCFBP13507_11115 | Not Available | Positive | 2522126 - 2524015 | 69616.9 |
| putative hydroxymethylpyrimidine transporter cytx | PviCFBP13507_11120 | Not Available | Positive | 2524478 - 2525767 | 45166.4 |
| duf3298 domain-containing protein | PviCFBP13507_11125 | Not Available | Negative | 2525736 - 2526482 | 27456.2 |
| nudix domain-containing protein | PviCFBP13507_11135 | Not Available | Positive | 2526691 - 2527308 | 23049.3 |
| duf1249 domain-containing protein | PviCFBP13507_11140 | Not Available | Positive | 2527299 - 2527751 | 17270.9 |
| hypothetical protein | PviCFBP13507_11150 | Not Available | Positive | 2529380 - 2529799 | 15882.0 |
| hypothetical protein | PviCFBP13507_11155 | Not Available | Positive | 2529792 - 2530241 | 16813.6 |
| duf4926 domain-containing protein | PviCFBP13507_11160 | Not Available | Positive | 2530268 - 2530471 | 7374.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
