Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | PviCFBP13507_11055 | Not Available | Positive | 2508153 - 2509109 | 36854.4 |
| hypothetical protein | PviCFBP13507_11060 | Not Available | Positive | 2509141 - 2509914 | 29839.6 |
| hypothetical protein | PviCFBP13507_11065 | Not Available | Positive | 2509904 - 2511067 | 43541.4 |
| toluene tolerance protein | PviCFBP13507_11070 | Not Available | Negative | 2511108 - 2511746 | 23942.1 |
| lipid a export permease/atp-binding protein msba | PviCFBP13507_11075 | Not Available | Positive | 2511863 - 2513665 | 65910.4 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | PviCFBP13507_11080 | Not Available | Positive | 2513852 - 2515273 | 50118.4 |
| metal abc transporter atpase | PviCFBP13507_11085 | Not Available | Negative | 2515312 - 2516274 | 36532.4 |
| aldo/keto reductase | PviCFBP13507_11090 | Not Available | Negative | 2516311 - 2517126 | 29042.9 |
| fad-dependent oxidoreductase | PviCFBP13507_11095 | Not Available | Negative | 2517123 - 2518298 | 41866.7 |
| multidrug dmt transporter | PviCFBP13507_11100 | Not Available | Negative | 2518347 - 2518679 | 11678.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
