Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosyltransferase i rfag | PviCFBP13507_11005 | Not Available | Positive | 2491628 - 2492749 | 42059.7 |
| lipopolysaccharide core heptose(i) kinase rfap | PviCFBP13507_11010 | Not Available | Positive | 2492749 - 2493555 | 30724.2 |
| heptose kinase | PviCFBP13507_11015 | Not Available | Positive | 2493555 - 2494289 | 28646.3 |
| lipopolysaccharide kinase | PviCFBP13507_11020 | Not Available | Positive | 2494286 - 2495065 | 29589.3 |
| serine/threonine protein kinase | PviCFBP13507_11025 | Not Available | Positive | 2495065 - 2496510 | 54157.1 |
| type iii effector | PviCFBP13507_11030 | Not Available | Negative | 2496538 - 2502627 | 225906.0 |
| carbamoyltransferase | PviCFBP13507_11035 | Not Available | Positive | 2502949 - 2504706 | 65508.9 |
| glycosyltransferase | PviCFBP13507_11040 | Not Available | Positive | 2504690 - 2505820 | 41795.6 |
| gnat family n-acetyltransferase | PviCFBP13507_11045 | Not Available | Positive | 2505820 - 2506716 | 33603.0 |
| pig-l family deacetylase | PviCFBP13507_11050 | Not Available | Positive | 2506686 - 2508122 | 53789.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
