Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_10955 | Not Available | Negative | 2475431 - 2475691 | 9210.11 |
| duf3077 domain-containing protein | PviCFBP13507_10960 | Not Available | Negative | 2475798 - 2476028 | 8256.95 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | PviCFBP13507_10965 | Not Available | Positive | 2476406 - 2477242 | 31730.4 |
| peptide-methionine (s)-s-oxide reductase msra | PviCFBP13507_10970 | Not Available | Negative | 2477372 - 2478019 | 23521.9 |
| ggdef domain-containing protein | PviCFBP13507_10975 | Not Available | Negative | 2478167 - 2480860 | 100718.0 |
| dihydrolipoyllysine-residue acetyltransferase | PviCFBP13507_10980 | Not Available | Negative | 2481627 - 2483270 | 56482.4 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | PviCFBP13507_10985 | Not Available | Negative | 2483413 - 2486058 | 99461.2 |
| bifunctional | PviCFBP13507_10990 | Not Available | Positive | 2486441 - 2489398 | 110947.0 |
| lipopolysaccharide heptosyltransferase ii | PviCFBP13507_10995 | Not Available | Positive | 2489527 - 2490561 | 38081.0 |
| lipopolysaccharide heptosyltransferase i | PviCFBP13507_11000 | Not Available | Positive | 2490564 - 2491628 | 39265.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
