Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| betaine-aldehyde dehydrogenase | PviCFBP13507_10905 | Not Available | Negative | 2464966 - 2466438 | 53204.4 |
| transcriptional regulator beti | PviCFBP13507_10910 | Not Available | Negative | 2466544 - 2467137 | 21976.5 |
| choline abc transporter atp-binding protein | PviCFBP13507_10915 | Not Available | Negative | 2467524 - 2468702 | 43402.8 |
| choline abc transporter permease subunit | PviCFBP13507_10920 | Not Available | Negative | 2468699 - 2469544 | 30516.5 |
| choline abc transporter substrate-binding protein | PviCFBP13507_10925 | Not Available | Negative | 2469612 - 2470559 | 34528.5 |
| glxa family transcriptional regulator | PviCFBP13507_10930 | Not Available | Positive | 2471459 - 2472562 | 40984.6 |
| methyl-accepting chemotaxis protein | PviCFBP13507_10935 | Not Available | Negative | 2472678 - 2474303 | 58650.2 |
| hypothetical protein | PviCFBP13507_10940 | Not Available | Negative | 2474370 - 2474666 | 10622.1 |
| hypothetical protein | PviCFBP13507_10945 | Not Available | Positive | 2474723 - 2474956 | 8364.72 |
| cell division protein zapa | PviCFBP13507_10950 | Not Available | Positive | 2474953 - 2475255 | 10874.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
