Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_10850 | Not Available | Positive | 2450909 - 2451205 | 11207.4 |
| gnat family n-acetyltransferase | PviCFBP13507_10860 | Not Available | Negative | 2451684 - 2452142 | 17434.9 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_10865 | Not Available | Positive | 2452434 - 2453189 | 28061.8 |
| tigr01666 family membrane protein | PviCFBP13507_10870 | Not Available | Negative | 2453152 - 2455350 | 81456.3 |
| aminoacetone oxidase family fad-binding enzyme | PviCFBP13507_10875 | Not Available | Negative | 2455465 - 2456643 | 42810.4 |
| atp-dependent rna helicase dbpa | PviCFBP13507_10880 | Not Available | Negative | 2456761 - 2458140 | 49915.8 |
| mfs transporter | PviCFBP13507_10885 | Not Available | Negative | 2458607 - 2460019 | 50141.0 |
| tldd/pmba family protein | PviCFBP13507_10890 | Not Available | Negative | 2460030 - 2461355 | 48567.8 |
| tldd/pmba family protein | PviCFBP13507_10895 | Not Available | Negative | 2461355 - 2462797 | 52196.5 |
| choline dehydrogenase | PviCFBP13507_10900 | Not Available | Negative | 2463101 - 2464801 | 62605.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
