Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive channel msck | PviCFBP13507_10800 | Not Available | Negative | 2428279 - 2431665 | 125865.0 |
| potassium/proton antiporter | PviCFBP13507_10805 | Not Available | Negative | 2431704 - 2433446 | 61356.9 |
| adp-ribosylating toxin | PviCFBP13507_10810 | Not Available | Positive | 2433693 - 2436284 | 95304.1 |
| adp-ribosylating toxin | PviCFBP13507_10815 | Not Available | Positive | 2436406 - 2438901 | 91992.8 |
| acyl-coa dehydrogenase | PviCFBP13507_10820 | Not Available | Negative | 2438936 - 2440738 | 66149.9 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | PviCFBP13507_10825 | Not Available | Negative | 2441231 - 2445184 | 142921.0 |
| sodium/proline symporter putp | PviCFBP13507_10830 | Not Available | Positive | 2445634 - 2447121 | 52858.3 |
| polysaccharide lyase family 7 protein | PviCFBP13507_10835 | Not Available | Negative | 2447205 - 2447876 | 25284.6 |
| two-component system response regulator | PviCFBP13507_10840 | Not Available | Positive | 2448194 - 2450323 | 78722.6 |
| metal-dependent hydrolase | PviCFBP13507_10845 | Not Available | Positive | 2450364 - 2450885 | 20048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
