Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | PviCFBP13507_10700 | Not Available | Negative | 2404082 - 2404900 | 28060.0 |
| yggs family pyridoxal phosphate-dependent enzyme | PviCFBP13507_10705 | Not Available | Negative | 2404923 - 2405609 | 24443.2 |
| twitching motility protein pilt | PviCFBP13507_10710 | Not Available | Positive | 2405665 - 2406699 | 37859.0 |
| peptidoglycan endopeptidase | PviCFBP13507_10715 | Not Available | Negative | 2406754 - 2407437 | 25207.3 |
| hypothetical protein | PviCFBP13507_10720 | Not Available | Positive | 2407688 - 2408092 | 15437.0 |
| dihydroorotase | PviCFBP13507_10725 | Not Available | Negative | 2408510 - 2409781 | 44159.0 |
| aspartate carbamoyltransferase catalytic subunit | PviCFBP13507_10730 | Not Available | Negative | 2409778 - 2410782 | 36429.3 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | PviCFBP13507_10735 | Not Available | Negative | 2410795 - 2411307 | 18488.4 |
| holliday junction resolvase ruvx | PviCFBP13507_10740 | Not Available | Negative | 2411405 - 2411845 | 15981.2 |
| yqge/algh family protein | PviCFBP13507_10745 | Not Available | Negative | 2411845 - 2412417 | 20434.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
