Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur carrier protein this | PviCFBP13507_10650 | Not Available | Positive | 2396948 - 2397148 | 7003.32 |
| thiazole synthase | PviCFBP13507_10655 | Not Available | Positive | 2397204 - 2397998 | 28290.8 |
| trna (guanosine(46)-n7)-methyltransferase trmb | PviCFBP13507_10660 | Not Available | Positive | 2398010 - 2398744 | 27610.9 |
| duf3392 domain-containing protein | PviCFBP13507_10665 | Not Available | Negative | 2398874 - 2399197 | 11453.5 |
| yggw family oxidoreductase | PviCFBP13507_10670 | Not Available | Negative | 2399207 - 2400421 | 45279.9 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | PviCFBP13507_10675 | Not Available | Negative | 2400418 - 2401011 | 21180.3 |
| duf4426 domain-containing protein | PviCFBP13507_10680 | Not Available | Negative | 2401011 - 2401445 | 15963.2 |
| methionine biosynthesis protein metw | PviCFBP13507_10685 | Not Available | Negative | 2401468 - 2402088 | 23576.1 |
| homoserine o-acetyltransferase | PviCFBP13507_10690 | Not Available | Negative | 2402096 - 2403235 | 41691.4 |
| yggt family protein | PviCFBP13507_10695 | Not Available | Negative | 2403465 - 2404055 | 21629.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
