Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| insulinase family protein | PviCFBP13507_10600 | Not Available | Negative | 2387214 - 2388653 | 51926.2 |
| insulinase family protein | PviCFBP13507_10605 | Not Available | Negative | 2388650 - 2389975 | 49148.6 |
| signal recognition particle-docking protein ftsy | PviCFBP13507_10610 | Not Available | Positive | 2390234 - 2391760 | 54024.9 |
| cell division atp-binding protein ftse | PviCFBP13507_10615 | Not Available | Positive | 2391757 - 2392428 | 24582.2 |
| cell division protein ftsx | PviCFBP13507_10620 | Not Available | Positive | 2392425 - 2393459 | 37256.4 |
| rna polymerase sigma factor rpoh | PviCFBP13507_10625 | Not Available | Positive | 2393574 - 2394428 | 32530.5 |
| hypothetical protein | PviCFBP13507_10630 | Not Available | Negative | 2394476 - 2394715 | 9204.65 |
| hypothetical protein | PviCFBP13507_10635 | Not Available | Negative | 2394891 - 2395091 | 7497.68 |
| monofunctional biosynthetic peptidoglycan transglycosylase | PviCFBP13507_10640 | Not Available | Negative | 2395666 - 2396376 | 27021.3 |
| duf423 domain-containing protein | PviCFBP13507_10645 | Not Available | Positive | 2396457 - 2396837 | 13134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
