Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | PviCFBP13507_10550 | Not Available | Negative | 2377546 - 2378025 | 17856.5 |
| coniferyl aldehyde dehydrogenase | PviCFBP13507_10555 | Not Available | Negative | 2378185 - 2379612 | 53003.1 |
| tetr family transcriptional regulator | PviCFBP13507_10560 | Not Available | Positive | 2379778 - 2380440 | 25562.8 |
| sulfurtransferase | PviCFBP13507_10565 | Not Available | Positive | 2380491 - 2381348 | 30817.5 |
| hydrolase | PviCFBP13507_10570 | Not Available | Negative | 2381359 - 2382405 | 38747.9 |
| addiction module antidote protein, higa family | PviCFBP13507_10575 | Not Available | Negative | 2382531 - 2382818 | 10693.8 |
| killer protein | PviCFBP13507_10580 | Not Available | Negative | 2382831 - 2383109 | 10517.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | PviCFBP13507_10585 | Not Available | Negative | 2383423 - 2384007 | 21149.1 |
| peptidase m16 | PviCFBP13507_10590 | Not Available | Negative | 2384007 - 2385470 | 51718.1 |
| insulinase family protein | PviCFBP13507_10595 | Not Available | Negative | 2385467 - 2386819 | 49881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
