Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphorylcholine phosphatase | PviCFBP13507_10500 | Not Available | Positive | 2367805 - 2368863 | 39573.8 |
| dihydroxy-acid dehydratase | PviCFBP13507_10505 | Not Available | Negative | 2369449 - 2371296 | 65969.8 |
| transposase | PviCFBP13507_10510 | Not Available | Positive | 2371574 - 2372032 | 17322.0 |
| hypothetical protein | PviCFBP13507_10515 | Not Available | Negative | 2372261 - 2372776 | 19150.7 |
| class i sam-dependent rrna methyltransferase | PviCFBP13507_10520 | Not Available | Negative | 2373019 - 2374215 | 43857.0 |
| type 1 glutamine amidotransferase | PviCFBP13507_10525 | Not Available | Negative | 2374297 - 2374836 | 18881.2 |
| hdod domain-containing protein | PviCFBP13507_10530 | Not Available | Positive | 2375020 - 2375886 | 31842.8 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | PviCFBP13507_10535 | Not Available | Positive | 2375932 - 2376744 | 30365.0 |
| multidrug transporter | PviCFBP13507_10540 | Not Available | Positive | 2376844 - 2377182 | 11368.1 |
| ferredoxin | PviCFBP13507_10545 | Not Available | Negative | 2377190 - 2377444 | 9491.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
