Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease subunit hslv | PviCFBP13507_10445 | Not Available | Negative | 2354837 - 2355367 | 18827.6 |
| cell division protein | PviCFBP13507_10450 | Not Available | Negative | 2355580 - 2356275 | 24613.8 |
| arginine--trna ligase | PviCFBP13507_10455 | Not Available | Negative | 2356277 - 2358013 | 63634.1 |
| primosomal protein n' | PviCFBP13507_10460 | Not Available | Negative | 2358173 - 2360392 | 82048.2 |
| 50s ribosomal protein l31 | PviCFBP13507_10465 | Not Available | Positive | 2360558 - 2360779 | 7880.49 |
| nuclease | PviCFBP13507_10470 | Not Available | Positive | 2360793 - 2361587 | 28766.9 |
| malate dehydrogenase | PviCFBP13507_10475 | Not Available | Positive | 2361771 - 2363039 | 45251.8 |
| duf3482 domain-containing protein | PviCFBP13507_10485 | Not Available | Negative | 2364241 - 2365629 | 50413.6 |
| duf2868 domain-containing protein | PviCFBP13507_10490 | Not Available | Negative | 2365622 - 2367001 | 50615.7 |
| dihydrofolate reductase | PviCFBP13507_10495 | Not Available | Positive | 2367111 - 2367623 | 18964.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
