Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3999 domain-containing protein | PviCFBP13507_10295 | Not Available | Negative | 2317659 - 2319038 | 49908.5 |
| duf2339 domain-containing protein | PviCFBP13507_10300 | Not Available | Negative | 2319035 - 2321890 | 103211.0 |
| glycogen/starch/alpha-glucan phosphorylase | PviCFBP13507_10305 | Not Available | Negative | 2322122 - 2324572 | 92038.8 |
| prolyl aminopeptidase | PviCFBP13507_10310 | Not Available | Positive | 2324854 - 2325825 | 36621.4 |
| d-tyrosyl-trna(tyr) deacylase | PviCFBP13507_10315 | Not Available | Positive | 2325865 - 2326302 | 15377.7 |
| glucan biosynthesis protein g | PviCFBP13507_10320 | Not Available | Positive | 2326566 - 2328467 | 70587.4 |
| glucans biosynthesis glucosyltransferase mdoh | PviCFBP13507_10325 | Not Available | Positive | 2328460 - 2331042 | 96802.0 |
| methyl-accepting chemotaxis protein | PviCFBP13507_10330 | Not Available | Negative | 2331741 - 2333684 | 70124.7 |
| methyl-accepting chemotaxis protein | PviCFBP13507_10335 | Not Available | Negative | 2333892 - 2335808 | 68387.0 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | PviCFBP13507_10340 | Not Available | Negative | 2335903 - 2336610 | 26367.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
