Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent monooxygenase | PviCFBP13507_10140 | Not Available | Positive | 2278831 - 2280156 | 47971.7 |
| aliphatic sulfonate abc transporter substrate-binding protein | PviCFBP13507_10145 | Not Available | Positive | 2280478 - 2281413 | 33691.3 |
| l-glyceraldehyde 3-phosphate reductase | PviCFBP13507_10150 | Not Available | Positive | 2281440 - 2282477 | 38168.3 |
| amidase | PviCFBP13507_10155 | Not Available | Negative | 2282625 - 2284424 | 65472.8 |
| nitrogen regulation protein nr(i) | PviCFBP13507_10160 | Not Available | Negative | 2284534 - 2285970 | 53166.4 |
| nitrogen regulation protein nr(ii) | PviCFBP13507_10165 | Not Available | Negative | 2285967 - 2287052 | 40004.6 |
| duf4124 domain-containing protein | PviCFBP13507_10170 | Not Available | Negative | 2287578 - 2288201 | 22866.8 |
| duf4124 domain-containing protein | PviCFBP13507_10175 | Not Available | Negative | 2288198 - 2288737 | 19797.7 |
| chorismate mutase | PviCFBP13507_10180 | Not Available | Negative | 2288807 - 2289364 | 20392.7 |
| glutamate--ammonia ligase | PviCFBP13507_10185 | Not Available | Negative | 2289549 - 2290955 | 51783.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
