Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sfnb family sulfur acquisition oxidoreductase | PviCFBP13507_10090 | Not Available | Negative | 2265056 - 2266321 | 45702.4 |
| hypothetical protein | PviCFBP13507_10095 | Not Available | Negative | 2266682 - 2267410 | 26411.0 |
| l-cystine abc transporter atp-binding protein yecc | PviCFBP13507_10100 | Not Available | Negative | 2267984 - 2268727 | 27187.2 |
| cystine abc transporter permease | PviCFBP13507_10105 | Not Available | Negative | 2268731 - 2269399 | 24580.6 |
| cystine abc transporter substrate-binding protein | PviCFBP13507_10110 | Not Available | Negative | 2269396 - 2270193 | 28876.8 |
| d-cysteine desulfhydrase | PviCFBP13507_10115 | Not Available | Negative | 2270403 - 2271401 | 35345.4 |
| serine acetyltransferase | PviCFBP13507_10120 | Not Available | Positive | 2271616 - 2272569 | 34412.0 |
| high-affinity choline transporter bett | PviCFBP13507_10125 | Not Available | Positive | 2272891 - 2274885 | 73293.2 |
| laci family transcriptional regulator | PviCFBP13507_10130 | Not Available | Negative | 2275269 - 2276315 | 37627.2 |
| tonb-dependent receptor | PviCFBP13507_10135 | Not Available | Positive | 2276534 - 2278801 | 82835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
