Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | PviCFBP13507_10040 | Not Available | Positive | 2253538 - 2254608 | 38556.6 |
| acrb/acrd/acrf family protein | PviCFBP13507_10045 | Not Available | Positive | 2254605 - 2257709 | 113841.0 |
| class i sam-dependent methyltransferase | PviCFBP13507_10050 | Not Available | Negative | 2257850 - 2258476 | 23610.8 |
| acyl carrier protein | PviCFBP13507_10055 | Not Available | Negative | 2258585 - 2258836 | 9743.65 |
| hypothetical protein | PviCFBP13507_10060 | Not Available | Negative | 2258826 - 2259398 | 20329.9 |
| abc transporter permease | PviCFBP13507_10065 | Not Available | Negative | 2259515 - 2260159 | 23041.0 |
| methionine abc transporter atp-binding protein | PviCFBP13507_10070 | Not Available | Negative | 2260149 - 2261279 | 41332.1 |
| methionine abc transporter substrate-binding protein | PviCFBP13507_10075 | Not Available | Negative | 2261276 - 2262064 | 28340.1 |
| fmn-dependent monooxygenase | PviCFBP13507_10080 | Not Available | Negative | 2262464 - 2263825 | 50843.9 |
| sfnb family sulfur acquisition oxidoreductase | PviCFBP13507_10085 | Not Available | Negative | 2263825 - 2265030 | 43505.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
