Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_09980 | Not Available | Positive | 2241205 - 2241810 | 20916.0 |
| thioredoxin reductase | PviCFBP13507_09985 | Not Available | Positive | 2241897 - 2242517 | 23166.2 |
| molybdopterin-binding protein | PviCFBP13507_09990 | Not Available | Positive | 2242514 - 2243284 | 29216.0 |
| iron uptake system protein efeo | PviCFBP13507_09995 | Not Available | Negative | 2243648 - 2244472 | 30194.8 |
| deferrochelatase/peroxidase efeb | PviCFBP13507_10000 | Not Available | Negative | 2244502 - 2245812 | 47720.4 |
| multidrug dmt transporter permease | PviCFBP13507_10005 | Not Available | Negative | 2245852 - 2247060 | 43113.1 |
| iron transporter | PviCFBP13507_10010 | Not Available | Negative | 2247069 - 2247923 | 30563.9 |
| dna-3-methyladenine glycosylase | PviCFBP13507_10015 | Not Available | Positive | 2248193 - 2248858 | 24162.5 |
| class c beta-lactamase | PviCFBP13507_10020 | Not Available | Negative | 2248855 - 2250033 | 43401.0 |
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13507_10035 | Not Available | Positive | 2252423 - 2253541 | 39556.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
