Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter substrate-binding protein | PviCFBP13507_09930 | Not Available | Negative | 2230587 - 2231585 | 36743.5 |
| ion transporter | PviCFBP13507_09935 | Not Available | Negative | 2231686 - 2232519 | 31077.6 |
| rnd transporter | PviCFBP13507_09940 | Not Available | Negative | 2232694 - 2234127 | 51686.2 |
| hlyd family secretion protein | PviCFBP13507_09945 | Not Available | Negative | 2234124 - 2235008 | 32795.3 |
| duf1656 domain-containing protein | PviCFBP13507_09950 | Not Available | Negative | 2235005 - 2235214 | 7760.85 |
| fusaric acid resistance protein | PviCFBP13507_09955 | Not Available | Negative | 2235211 - 2237298 | 77959.3 |
| marr family transcriptional regulator | PviCFBP13507_09960 | Not Available | Negative | 2237295 - 2237747 | 16029.2 |
| polysaccharide lyase family 7 protein | PviCFBP13507_09965 | Not Available | Positive | 2238291 - 2238956 | 24727.1 |
| two-component sensor histidine kinase | PviCFBP13507_09970 | Not Available | Negative | 2238975 - 2240369 | 51470.3 |
| dna-binding response regulator | PviCFBP13507_09975 | Not Available | Negative | 2240342 - 2241037 | 26577.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
