Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | PviCFBP13507_09830 | Not Available | Positive | 2212002 - 2214194 | 79320.3 |
| nucleoid-associated protein, ybab/ebfc family | PviCFBP13507_09835 | Not Available | Positive | 2214256 - 2214582 | 11695.4 |
| aldehyde dehydrogenase family protein | PviCFBP13507_09840 | Not Available | Negative | 2215125 - 2216591 | 51375.5 |
| rida family protein | PviCFBP13507_09845 | Not Available | Negative | 2216741 - 2217148 | 14777.7 |
| dsd1 family plp-dependent enzyme | PviCFBP13507_09850 | Not Available | Negative | 2217138 - 2218289 | 41708.9 |
| lysr family transcriptional regulator | PviCFBP13507_09855 | Not Available | Positive | 2218385 - 2219269 | 32937.9 |
| recombination protein recr | PviCFBP13507_09860 | Not Available | Positive | 2219389 - 2219991 | 21508.2 |
| metal-dependent hydrolase | PviCFBP13507_09865 | Not Available | Negative | 2220054 - 2220872 | 30926.3 |
| flagellar biosynthesis protein flhb | PviCFBP13507_09870 | Not Available | Negative | 2220992 - 2221315 | 11933.0 |
| flagellar hook-length control protein flik | PviCFBP13507_09875 | Not Available | Negative | 2221315 - 2222934 | 57394.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
